Transcript: lnc-PSMG4-18:5

Basic information

LNCipedia transcript ID: lnc-PSMG4-18:5 
LNCipedia gene ID: lnc-PSMG4-18
Location (hg19): chr6:3469501-3483790
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2728 bp
Exons: 16
Sources: NONCODE v4
Alternative transcript names: NONHSAT107136
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.667 non-coding 
CPAT coding probability 15.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSMG4-18:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PSMG4-2:9
4.0 lnc-PSMG4-2:9
4.1 lnc-PSMG4-2:9
5.0 lnc-PSMG4-2:9
5.1 lnc-RIPK1-158:5
5.2 lnc-PSMG4-18:5