Transcript: lnc-PTDSS1-2:2

Basic information

LNCipedia transcript ID: lnc-PTDSS1-2:2 
LNCipedia gene ID: lnc-PTDSS1-2
Location (hg19): chr8:96981635-96986144
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 898 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT127848
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.9988 non-coding 
CPAT coding probability 5.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTDSS1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTDSS1-2:2
4.0 lnc-PTDSS1-2:2
4.1 lnc-PTDSS1-2:2
5.0 lnc-PTDSS1-2:2
5.1 lnc-CA2-117:1
5.2 lnc-PTDSS1-2:2