Transcript: lnc-PTGS2-5:1

Basic information

LNCipedia transcript ID: lnc-PTGS2-5:1 
LNCipedia gene ID: lnc-PTGS2-5
Location (hg19): chr1:187475970-187476251
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 260 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT008464
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -348.0598 non-coding 
CPAT coding probability 3.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTGS2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTGS2-5:1
4.0 lnc-PTGS2-5:1
4.1 lnc-PTGS2-5:1
5.0 lnc-PTGS2-5:1
5.1 lnc-MYOG-131:1
5.2 lnc-PTGS2-5:1