Transcript: lnc-PTK6-1:1

Basic information

LNCipedia transcript ID: lnc-PTK6-1:1 
LNCipedia gene ID: lnc-PTK6-1
Location (hg19): chr20:62145589-62152117
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6529 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT080894
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.8077 non-coding 
CPAT coding probability 95.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PTK6-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTK6-1:1
4.0 lnc-PTK6-1:1
4.1 lnc-PTK6-1:1
5.0 lnc-PTK6-1:1
5.1 lnc-SPATA2-197:1
5.2 lnc-PTK6-1:1