Transcript: lnc-PTPRD-6:1

Basic information

LNCipedia transcript ID: lnc-PTPRD-6:1 
LNCipedia gene ID: lnc-PTPRD-6
Location (hg19): chr9:10829752-10830308
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 557 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT130206
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 65.5296 coding 
CPAT coding probability 82.92% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PTPRD-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPRD-6:1
4.0 lnc-PTPRD-6:1
4.1 lnc-PTPRD-6:1
5.0 lnc-PTPRD-6:1
5.1 lnc-CER1-23:1
5.2 lnc-PTPRD-6:1