Transcript: lnc-PTS-1:26

Basic information

LNCipedia transcript ID: lnc-PTS-1:26 
LNCipedia gene ID: lnc-PTS-1
Location (hg19): chr11:112161033-112163444
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1602 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250303.2|ENST00000419895.3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -55.5714 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTS-1:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PTS-1:26
5.0 lnc-PTS-1:26
5.1 lnc-PTS-7:19
5.2 lnc-PTS-1:26