Transcript: lnc-PXDN-9:1

Basic information

LNCipedia transcript ID: lnc-PXDN-9:1 
LNCipedia gene ID: lnc-PXDN-9
Location (hg19): chr2:2312485-2314204
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 735 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT068671
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.1684 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PXDN-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PXDN-9:1
4.0 lnc-PXDN-9:1
4.1 lnc-PXDN-9:1
5.0 lnc-PXDN-9:1
5.1 lnc-RAD51AP2-199:1
5.2 lnc-PXDN-9:1