Transcript: lnc-PXYLP1-3:8

Basic information

LNCipedia transcript ID: lnc-PXYLP1-3:8 
LNCipedia gene ID: lnc-PXYLP1-3
Location (hg19): chr3:141087166-141124598
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 821 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT092428
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.8083 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PXYLP1-3:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACPL2-3:2
4.0 lnc-ACPL2-3:2
4.1 lnc-ACPL2-3:2
5.0 lnc-ACPL2-3:2
5.1 lnc-PXYLP1-3:2
5.2 lnc-PXYLP1-3:8