Transcript: lnc-PYDC2-1:9

Basic information

LNCipedia transcript ID: lnc-PYDC2-1:9 
LNCipedia gene ID: lnc-PYDC2-1
RefSeq ID: NR_120606
Location (hg19): chr3:191143313-191308145
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1182 bp
Exons: 7
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120606; NR_120606.1
Alternative gene names: LINCR-0002


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.1493 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PYDC2-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PYDC2-1:9
4.0 lnc-PYDC2-1:9
4.1 lnc-PYDC2-1:9
5.0 lnc-PYDC2-1:9
5.1 lnc-MUC20-53:1
5.2 lnc-PYDC2-1:9