Transcript: lnc-PYURF-3:10

Basic information

LNCipedia transcript ID: lnc-PYURF-3:10 
LNCipedia gene ID: lnc-PYURF-3
Location (hg19): chr4:89336534-89377935
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2583 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000073077.1|ENCT00000333318.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.4987 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PYURF-3:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PIGY-3:12
5.0 lnc-PIGY-3:12
5.1 lnc-PYURF-3:2
5.2 lnc-PYURF-3:10