Transcript: lnc-PZP-1:1

Basic information

LNCipedia transcript ID: lnc-PZP-1:1 
LNCipedia gene ID: lnc-PZP-1
Location (hg19): chr12:9381129-9386803
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1201 bp
Exons: 9
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000543404; NR_040112
Alternative gene names: ENSG00000256359; RP11-118B22.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 502.7466 coding 
CPAT coding probability 66.69% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PZP-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PZP-1:1
3.1 lnc-PZP-1:1
4.0 lnc-PZP-1:1
4.1 lnc-PZP-1:1
5.0 lnc-PZP-1:1
5.1 lnc-M6PR-10:1
5.2 lnc-PZP-1:1