Transcript: lnc-PZP-2:2

Basic information

LNCipedia transcript ID: lnc-PZP-2:2 
LNCipedia gene ID: lnc-PZP-2
Location (hg19): chr12:9400252-9412153
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 540 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000545343
Alternative gene names: ENSG00000256069; RP11-118B22.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -393.0507 non-coding 
CPAT coding probability 2.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PZP-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PZP-2:2
3.1 lnc-PZP-2:2
4.0 lnc-PZP-2:2
4.1 lnc-PZP-2:2
5.0 lnc-PZP-2:2
5.1 lnc-M6PR-13:2
5.2 lnc-PZP-2:2