Transcript: lnc-QKI-4:3

Basic information

LNCipedia transcript ID: lnc-QKI-4:3 
LNCipedia gene ID: lnc-QKI-4
Ensembl Gene ID: ENSG00000227455
Ensembl Transcript ID: ENST00000605741
Location (hg19): chr6:165241239-165245119
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3881 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT115994; ENST00000605741.1
Alternative gene names: ENSG00000227455.2; RP11-300M24.1; AL450345.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.791 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-QKI-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-QKI-4:3
4.0 lnc-QKI-4:3
4.1 lnc-QKI-4:3
5.0 lnc-QKI-4:3
5.1 lnc-SYTL3-58:3
5.2 lnc-QKI-4:3