Transcript: lnc-QPCT-1:5

Basic information

LNCipedia transcript ID: lnc-QPCT-1:5 
LNCipedia gene ID: lnc-QPCT-1
Location (hg19): chr2:37552039-37553306
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1268 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232028.1|ENCT00000222638.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -56.5768 non-coding 
CPAT coding probability 12.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-QPCT-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-QPCT-1:5
5.0 lnc-QPCT-1:5
5.1 lnc-RASGRP3-27:1
5.2 lnc-QPCT-1:5