Transcript: lnc-QRFP-5:1

Basic information

LNCipedia transcript ID: lnc-QRFP-5:1 
LNCipedia gene ID: lnc-QRFP-5
RefSeq ID: NR_027440
Location (hg19): chr9:133452737-133454881
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2145 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT135151; NR_027440; NR_027440.1
Alternative gene names: LOC100272217


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.6037 non-coding 
CPAT coding probability 1.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-QRFP-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-QRFP-5:1
4.0 lnc-QRFP-5:1
4.1 lnc-QRFP-5:1
5.0 lnc-QRFP-5:1
5.1 lnc-SPOUT1-76:1
5.2 lnc-QRFP-5:1