Transcript: lnc-QRFP-5:2

Basic information

LNCipedia transcript ID: lnc-QRFP-5:2 
LNCipedia gene ID: lnc-QRFP-5
Location (hg19): chr9:133452818-133454825
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2008 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000109951.1|FTMT23400009231.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -45.6037 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-QRFP-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-QRFP-5:2
5.0 lnc-QRFP-5:2
5.1 lnc-SPOUT1-76:2
5.2 lnc-QRFP-5:2