Transcript: lnc-RAB11FIP2-2:4

Basic information

LNCipedia transcript ID: lnc-RAB11FIP2-2:4 
LNCipedia gene ID: lnc-RAB11FIP2-2
Location (hg19): chr10:119585588-119586584
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 321 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019037; NONHSAT016542
Alternative gene names: XLOC_008963; linc-PDZD8-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -217.1599 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB11FIP2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAB11FIP2-3:2
3.1 lnc-RAB11FIP2-2:4
4.0 lnc-RAB11FIP2-2:4
4.1 lnc-RAB11FIP2-2:4
5.0 lnc-RAB11FIP2-2:4
5.1 lnc-NSMCE4A-75:4
5.2 lnc-RAB11FIP2-2:4