Transcript: lnc-RAB20-2:11

Basic information

LNCipedia transcript ID: lnc-RAB20-2:11 
LNCipedia gene ID: lnc-RAB20-2
Location (hg19): chr13:110917598-110918460
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 863 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT035141
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.3013 non-coding 
CPAT coding probability 5.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB20-2:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COL4A2-AS2-2:1
4.0 lnc-COL4A2-AS2-2:1
4.1 lnc-COL4A2-AS2-2:1
5.0 lnc-COL4A2-AS2-2:1
5.1 lnc-IRS2-2:3
5.2 lnc-RAB20-2:11