Transcript: lnc-RAB33B-4:2

Basic information

LNCipedia transcript ID: lnc-RAB33B-4:2 
LNCipedia gene ID: lnc-RAB33B-4
Location (hg19): chr4:140477765-140481118
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3354 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272717.1|HBMT00001073345.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -85.1453 non-coding 
CPAT coding probability 3.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB33B-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RAB33B-4:2
5.0 lnc-RAB33B-4:2
5.1 lnc-NAA15-6:1
5.2 lnc-RAB33B-4:2