Transcript: lnc-RAB3B-2:1

Basic information

LNCipedia transcript ID: lnc-RAB3B-2:1 
LNCipedia gene ID: lnc-RAB3B-2
Location (hg19): chr1:52281601-52299745
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1013 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT003216
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1014.5119 coding 
CPAT coding probability 73.87% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RAB3B-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAB3B-2:1
4.0 lnc-RAB3B-2:1
4.1 lnc-RAB3B-2:1
5.0 lnc-RAB3B-2:1
5.1 lnc-TXNDC12-6:1
5.2 lnc-RAB3B-2:1