Transcript: lnc-RAB43-4:1

Basic information

LNCipedia transcript ID: lnc-RAB43-4:1 
LNCipedia gene ID: lnc-RAB43-4
Location (hg19): chr3:128679210-128684200
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1065 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000539989; NONHSAT091988
Alternative gene names: ENSG00000256880; AC112484.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.2484 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB43-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAB43-1:1
3.1 lnc-RAB43-1:1
4.0 lnc-RAB43-1:1
4.1 lnc-RAB43-1:1
5.0 lnc-RAB43-1:1
5.1 lnc-ISY1-RAB43-3:1
5.2 lnc-RAB43-4:1