Transcript: lnc-RAC3-1:5

Basic information

LNCipedia transcript ID: lnc-RAC3-1:5 
LNCipedia gene ID: lnc-RAC3-1
Location (hg19): chr17:79995780-79996256
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 477 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000264569.1|FTMT26800005160.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.7464 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAC3-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RAC3-1:5
5.0 lnc-RAC3-1:5
5.1 lnc-TSPAN10-35:1
5.2 lnc-RAC3-1:5