Transcript: lnc-RAD1-6:1

Basic information

LNCipedia transcript ID: lnc-RAD1-6:1 
LNCipedia gene ID: lnc-RAD1-6
Location (hg19): chr5:34587020-34587895
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 876 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000079484.1|FTMT21800002532.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -218.4775 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RAD1-6:1
5.0 lnc-RAD1-6:1
5.1 lnc-SELENOP-97:1
5.2 lnc-RAD1-6:1