Transcript: lnc-RAD21-1:3

Basic information

LNCipedia transcript ID: lnc-RAD21-1:3 
LNCipedia gene ID: lnc-RAD21-1
Location (hg19): chr8:117947913-117950670
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 358 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000103723.1|HBMT00001414544.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -713.1367 non-coding 
CPAT coding probability 4.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD21-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RAD21-1:3
5.0 lnc-RAD21-1:3
5.1 lnc-EXT1-11:4
5.2 lnc-RAD21-1:3