Transcript: lnc-RAD23B-10:2

Basic information

LNCipedia transcript ID: lnc-RAD23B-10:2 
LNCipedia gene ID: lnc-RAD23B-10
Location (hg19): chr9:110497106-110560626
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 335 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000106578.1|HBMT00001469862.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.9764 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD23B-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RAD23B-10:2
5.0 lnc-RAD23B-10:2
5.1 lnc-PRPF4-104:3
5.2 lnc-RAD23B-10:2