Transcript: lnc-RAD23B-3:1

Basic information

LNCipedia transcript ID: lnc-RAD23B-3:1 
LNCipedia gene ID: lnc-RAD23B-3
Location (hg19): chr9:109991358-110017878
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 465 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016117; NONHSAT133863
Alternative gene names: XLOC_007504; linc-RAD23B-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.7479 non-coding 
CPAT coding probability 3.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD23B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAD23B-3:1
3.1 lnc-RAD23B-3:1
4.0 lnc-RAD23B-3:1
4.1 lnc-RAD23B-3:1
5.0 lnc-RAD23B-3:1
5.1 lnc-PRPF4-114:5
5.2 lnc-RAD23B-3:1