Transcript: lnc-RAD23B-3:3

Basic information

LNCipedia transcript ID: lnc-RAD23B-3:3 
LNCipedia gene ID: lnc-RAD23B-3
Location (hg19): chr9:109984518-110010305
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 547 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000106551.1|MICT00000364332.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -62.9403 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD23B-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RAD23B-3:3
5.0 lnc-RAD23B-3:3
5.1 lnc-PRPF4-114:2
5.2 lnc-RAD23B-3:3