Transcript: lnc-RAD23B-3:6

Basic information

LNCipedia transcript ID: lnc-RAD23B-3:6 
LNCipedia gene ID: lnc-RAD23B-3
Location (hg19): chr9:109984579-109997625
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 462 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016664; NONHSAT133862
Alternative gene names: XLOC_007503; linc-RAD23B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.9403 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD23B-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAD23B-4:1
3.1 lnc-RAD23B-4:1
4.0 lnc-RAD23B-4:1
4.1 lnc-RAD23B-3:6
5.0 lnc-RAD23B-3:6
5.1 lnc-PRPF4-114:4
5.2 lnc-RAD23B-3:6