Transcript: lnc-RALGAPA2-2:2

Basic information

LNCipedia transcript ID: lnc-RALGAPA2-2:2 
LNCipedia gene ID: lnc-RALGAPA2-2
Location (hg19): chr20:20209412-20248481
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2651 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243810.1|FTMT27700017047.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.7949 non-coding 
CPAT coding probability 1.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RALGAPA2-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RALGAPA2-2:2
5.0 lnc-RALGAPA2-2:2
5.1 lnc-RRBP1-49:1
5.2 lnc-RALGAPA2-2:2