Transcript: lnc-RALGAPA2-2:4

Basic information

LNCipedia transcript ID: lnc-RALGAPA2-2:4 
LNCipedia gene ID: lnc-RALGAPA2-2
Location (hg19): chr20:20222913-20248459
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 10941 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243810.1|MICT00000214743.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 288.8862 coding 
CPAT coding probability 64.35% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RALGAPA2-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RALGAPA2-2:4
5.0 lnc-RALGAPA2-2:4
5.1 lnc-RRBP1-49:3
5.2 lnc-RALGAPA2-2:4