Transcript: lnc-RALGDS-2:1

Basic information

LNCipedia transcript ID: lnc-RALGDS-2:1 
LNCipedia gene ID: lnc-RALGDS-2
Location (hg19): chr9:135903518-135905802
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 567 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016498; NONHSAT135285
Alternative gene names: XLOC_007879; linc-TSC1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.3963 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RALGDS-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RALGDS-1:1
3.1 lnc-RALGDS-2:1
4.0 lnc-RALGDS-2:1
4.1 lnc-RALGDS-2:1
5.0 lnc-RALGDS-2:1
5.1 lnc-ABO-6:5
5.2 lnc-RALGDS-2:1