Transcript: lnc-RAP2B-3:1

Basic information

LNCipedia transcript ID: lnc-RAP2B-3:1 
LNCipedia gene ID: lnc-RAP2B-3
Location (hg19): chr3:153094619-153095351
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 384 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT092780; FPKM1_group_22240_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 31.7338 non-coding 
CPAT coding probability 15.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAP2B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf79-3:2
4.0 lnc-C3orf79-3:2
4.1 lnc-C3orf79-3:2
5.0 lnc-C3orf79-3:2
5.1 lnc-SELENOT-41:1
5.2 lnc-RAP2B-3:1