Transcript: lnc-RAPSN-1:3

Basic information

LNCipedia transcript ID: lnc-RAPSN-1:3 
LNCipedia gene ID: lnc-RAPSN-1
Location (hg19): chr11:47445974-47447802
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 546 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT021246
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 1535.2978 coding 
CPAT coding probability 98.56% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RAPSN-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAPSN-1:3
4.0 lnc-RAPSN-1:3
4.1 lnc-RAPSN-1:3
5.0 lnc-RAPSN-1:3
5.1 lnc-OR5W2-48:3
5.2 lnc-RAPSN-1:3