Transcript: lnc-RARRES2-3:1

Basic information

LNCipedia transcript ID: lnc-RARRES2-3:1 
LNCipedia gene ID: lnc-RARRES2-3
Ensembl Gene ID: ENSG00000239377
Ensembl Transcript ID: ENST00000497366
Location (hg19): chr7:150076943-150080973
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 420 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000497366.1; RP4-584D14.6-001; OTTHUMT00000350703.1
Alternative gene names: ENSG00000239377.1; RP4-584D14.6; OTTHUMG00000158329.1; AC073111.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -449.0971 non-coding 
CPAT coding probability 13.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RARRES2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RARRES2-3:1
4.0 lnc-RARRES2-3:1
4.1 lnc-RARRES2-3:1
5.0 lnc-RARRES2-3:1
5.1 lnc-KMT2C-48:2
5.2 lnc-RARRES2-3:1