Transcript: lnc-RASA1-28:1

Basic information

LNCipedia transcript ID: lnc-RASA1-28:1 
LNCipedia gene ID: lnc-RASA1-28
Location (hg19): chr5:87437639-87438254
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 616 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000076574.1|FTMT22000005215.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -109.6576 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RASA1-28:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RASA1-28:1
5.0 lnc-RASA1-28:1
5.1 lnc-MSH3-59:1
5.2 lnc-RASA1-28:1