Transcript: lnc-RASEF-6:1

Basic information

LNCipedia transcript ID: lnc-RASEF-6:1 
LNCipedia gene ID: lnc-RASEF-6
Location (hg19): chr9:85042265-85042940
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 676 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT132719
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.5261 non-coding 
CPAT coding probability 2.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RASEF-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75B-3:1
4.0 lnc-FAM75B-3:1
4.1 lnc-FAM75B-3:1
5.0 lnc-FAM75B-3:1
5.1 lnc-SEMA4D-101:1
5.2 lnc-RASEF-6:1