Transcript: lnc-RASGEF1A-2:2

Basic information

LNCipedia transcript ID: lnc-RASGEF1A-2:2 
LNCipedia gene ID: lnc-RASGEF1A-2
Location (hg19): chr10:43627337-43633824
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 906 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273008.1|MICT00000040647.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -144.7978 non-coding 
CPAT coding probability 41.53% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RASGEF1A-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RASGEF1A-2:2
5.0 lnc-RASGEF1A-2:2
5.1 lnc-LRRC18-98:1
5.2 lnc-RASGEF1A-2:2