Transcript: lnc-RASGRP1-1:2

Basic information

LNCipedia transcript ID: lnc-RASGRP1-1:2 
LNCipedia gene ID: lnc-RASGRP1-1
Location (hg19): chr15:39047295-39049571
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 550 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024073; NONHSAT041720
Alternative gene names: XLOC_011433; linc-RASGRP1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.6725 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RASGRP1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RASGRP1-1:2
3.1 lnc-RASGRP1-1:2
4.0 lnc-RASGRP1-1:2
4.1 lnc-RASGRP1-1:2
5.0 lnc-RASGRP1-1:2
5.1 lnc-VPS39-63:2
5.2 lnc-RASGRP1-1:2