Transcript: lnc-RASGRP1-3:6

Basic information

LNCipedia transcript ID: lnc-RASGRP1-3:6 
LNCipedia gene ID: lnc-RASGRP1-3
Location (hg19): chr15:38431796-38519092
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2497 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259380.1|ENST00000561320.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.4122 non-coding 
CPAT coding probability 93.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RASGRP1-3:6 no no no no

Available literature

  1. Wang (2015), Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer., Nucleic Acids Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RASGRP1-3:6
5.0 lnc-RASGRP1-3:6
5.1 lnc-NANOGP8-26:3
5.2 lnc-RASGRP1-3:6