Transcript: lnc-RASSF6-2:1

Basic information

LNCipedia transcript ID: lnc-RASSF6-2:1 
LNCipedia gene ID: lnc-RASSF6-2
Location (hg19): chr4:74340906-74342180
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1275 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr4_3292_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.0416 non-coding 
CPAT coding probability 20.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RASSF6-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RASSF6-2:1
4.0 lnc-RASSF6-2:1
4.1 lnc-RASSF6-2:1
5.0 lnc-RASSF6-2:1
5.1 lnc-CXCL11-38:1
5.2 lnc-RASSF6-2:1