Transcript: lnc-RBKS-1:4

Basic information

LNCipedia transcript ID: lnc-RBKS-1:4 
LNCipedia gene ID: lnc-RBKS-1
Location (hg19): chr2:27957840-27958477
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 496 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004186; NONHSAT069802
Alternative gene names: XLOC_002030; linc-SUPT7L


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -396.6124 non-coding 
CPAT coding probability 2.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBKS-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC074091.13.1-1:1
3.1 lnc-AC074091.13.1-1:1
4.0 lnc-AC074091.13.1-1:1
4.1 lnc-AC074091.13.1-1:1
5.0 lnc-AC074091.13.1-1:1
5.1 lnc-RBKS-1:3
5.2 lnc-RBKS-1:4