Transcript: lnc-RBKS-2:3

Basic information

LNCipedia transcript ID: lnc-RBKS-2:3 
LNCipedia gene ID: lnc-RBKS-2
Location (hg19): chr2:27965829-27967485
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1657 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_3083_NR_028308
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.8159 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBKS-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC074091.13.1-2:1
4.0 lnc-AC074091.13.1-2:1
4.1 lnc-AC074091.13.1-2:1
5.0 lnc-AC074091.13.1-2:1
5.1 lnc-RBKS-2:2
5.2 lnc-RBKS-2:3