Transcript: lnc-RBM11-13:1

Basic information

LNCipedia transcript ID: lnc-RBM11-13:1 
LNCipedia gene ID: lnc-RBM11-13
Location (hg19): chr21:16212636-16216520
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3807 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029195; NONHSAT081185
Alternative gene names: XLOC_013863; linc-USP25-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.0683 non-coding 
CPAT coding probability 88.95% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RBM11-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AF127577.1-3:1
3.1 lnc-AF127577.1-5:1
4.0 lnc-AF127577.1-5:1
4.1 lnc-AF127577.1-5:1
5.0 lnc-AF127577.1-5:1
5.1 lnc-OLIG1-138:1
5.2 lnc-RBM11-13:1