Transcript: lnc-RBM11-16:1

Basic information

LNCipedia transcript ID: lnc-RBM11-16:1 
LNCipedia gene ID: lnc-RBM11-16
Location (hg19): chr21:16280343-16285211
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4869 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT081188; FPKM1_group_19851_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.0372 non-coding 
CPAT coding probability 8.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBM11-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AF127577.1-7:1
4.0 lnc-AF127577.1-7:1
4.1 lnc-AF127577.1-7:1
5.0 lnc-AF127577.1-7:1
5.1 lnc-OLIG1-135:1
5.2 lnc-RBM11-16:1