Transcript: lnc-RBM22-4:1

Basic information

LNCipedia transcript ID: lnc-RBM22-4:1 
LNCipedia gene ID: lnc-RBM22-4
Location (hg19): chr5:150112956-150138198
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 473 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT104579
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
VERDRKKLARR 100% sense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score 549.4449 coding 
CPAT coding probability 15.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RBM22-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RBM22-4:1
4.0 lnc-RBM22-4:1
4.1 lnc-RBM22-4:1
5.0 lnc-RBM22-4:1
5.1 lnc-FAXDC2-42:1
5.2 lnc-RBM22-4:1