Transcript: lnc-RBM28-2:1

Basic information

LNCipedia transcript ID: lnc-RBM28-2:1 
LNCipedia gene ID: lnc-RBM28-2
Location (hg19): chr7:127861457-127876469
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 296 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013948; NONHSAT123174
Alternative gene names: XLOC_006597; linc-LRRC4-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.9659 non-coding 
CPAT coding probability 20.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBM28-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RBM28-2:1
3.1 lnc-RBM28-2:1
4.0 lnc-RBM28-2:1
4.1 lnc-RBM28-2:1
5.0 lnc-RBM28-2:1
5.1 lnc-UBE2H-28:1
5.2 lnc-RBM28-2:1