Transcript: lnc-RCL1-4:1

Basic information

LNCipedia transcript ID: lnc-RCL1-4:1 
LNCipedia gene ID: lnc-RCL1-4
Location (hg19): chr9:4741373-4742908
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1536 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000104592.1|FTMT23600000337.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -54.5513 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RCL1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RCL1-4:1
5.0 lnc-RCL1-4:1
5.1 lnc-RECK-270:1
5.2 lnc-RCL1-4:1