Transcript: lnc-RCOR2-2:1

Basic information

LNCipedia transcript ID: lnc-RCOR2-2:1 
LNCipedia gene ID: lnc-RCOR2-2
Location (hg19): chr11:63700871-63707041
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 274 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_489_chr11:63700870-63707041_76bGuttman_hES
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.5633 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RCOR2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RCOR2-2:1
4.0 lnc-RCOR2-2:1
4.1 lnc-RCOR2-2:1
5.0 lnc-RCOR2-2:1
5.1 lnc-LTBP3-92:1
5.2 lnc-RCOR2-2:1