Transcript: lnc-RDM1-1:3

Basic information

LNCipedia transcript ID: lnc-RDM1-1:3 
LNCipedia gene ID: lnc-RDM1-1
Location (hg19): chr17:34220885-34240743
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2496 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT053134
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.8465 non-coding 
CPAT coding probability 82.14% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RDM1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RDM1-1:3
4.0 lnc-RDM1-1:3
4.1 lnc-RDM1-1:3
5.0 lnc-RDM1-1:3
5.1 lnc-SRCIN1-73:2
5.2 lnc-RDM1-1:3