Transcript: lnc-RDX-1:5

Basic information

LNCipedia transcript ID: lnc-RDX-1:5 
LNCipedia gene ID: lnc-RDX-1
Location (hg19): chr11:109279624-109958899
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1042 bp
Exons: 8
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254659.2|MICT00000067027.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -141.5856 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RDX-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RDX-1:5
5.0 lnc-RDX-1:5
5.1 lnc-ARHGAP20-30:1
5.2 lnc-RDX-1:5